BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D05LP1|AL426022
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1659 1658 0.0
>3x_Contig1659
Length = 17570
Score = 1658 bits (834), Expect = 0.0
Identities = 851/856 (99%), Gaps = 2/856 (0%)
Strand = Plus / Minus
Query: 3 ctacctactacaattcaaggatagacacaacggtaatatcatgtacgactcacagggcca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3935 ctacctactacaattcaaggatagacacaacggtaatatcatgtacgactcacagggcca 3876
Query: 63 ttgtctacacattgatttcggttttatattcgatatcgtgcctgggggagtgaaattcga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3875 ttgtctacacattgatttcggttttatattcgatatcgtgcctgggggagtgaaattcga 3816
Query: 123 agccgtgcccytcaagctaacaaaagagatggtcaaagtcatgggcggtagc-aacacac 181
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3815 agccgtgcccttcaagctaacaaaagagatggtcaaagtcatgggcggtagccaacacac 3756
Query: 182 ccaggcgttcagccaattcgaagatctatgcgttgcaactttcctaggtataagacccta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3755 ccaggcgttcagccaattcgaagatctatgcgttgcaactttcctaggtataagacccta 3696
Query: 242 catgaacgtgatcatcgatggaatagtacccatgctagagagcagcttaccctgctttaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3695 catgaacgtgatcatcgatggaatagtacccatgctagagagcagcttaccctgctttaa 3636
Query: 302 agcacaaaagacaatcaagaacttgagaaacaggtttgttccgggtaagtctcctcagga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3635 agcacaaaagacaatcaagaacttgagaaacaggtttgttccgggtaagtctcctcagga 3576
Query: 362 agccgcccaacatatgagacagttgatccgccggtcctacgaatcgatgtttacaaaggg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3575 agccgcccaacatatgagacagttgatccgccggtcctacgaatcgatgtttacaaaggg 3516
Query: 422 ttacgatgagttccaaaggttgacgaacggaattccatattgaagagtggaaaaaaaaca 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3515 ttacgatgagttccaaaggttgacgaacggaattccatattgaagagtggaaaaaaaaca 3456
Query: 482 acaacaacaacaacaacaacaaccatgcccgatcctcgggcatggtctccataccgtacc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3455 acaacaacaacaacaacaacaaccatgcccgatcctcgggcatggtctccataccgtacc 3396
Query: 542 actctgttaccctgcaaaccgaacttcggtcatcccaagttcggtaaactattttacctt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3395 actctgttaccctgcaaaccgaacttcggtcatcccaagttcggtaaactattttacctt 3336
Query: 602 ttccgatcctcggccttggtccatatctccaccgccctcgcccccsaaacaaaaacaaaa 661
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3335 ttccgatcctcggccttggtccatatctccaccgccctcgcccccgaaacaaaaacaaaa 3276
Query: 662 gcaaggatgtatggagaaaccgaagccgctcttcatccttttttgcctcgcccatcatcg 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3275 gcaaggatgtatggagaaaccgaagccgctcttcatccttttttgcctcgcccatcatcg 3216
Query: 722 gccccttcgacaaacgagcgtaaaatgcccactggccaatcacaatcggtcctggcccca 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3215 gccccttcgacaaacgagcgtaaaatgcccactggccaatcacaatcggtcctggcccca 3156
Query: 782 gctcacataatcacccgtacgtwccattctaagtatctcaccaccctttaaccgcgctgc 841
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 3155 gctcacataatcacccgtacgtaccattctaagtatctcaccaccctttaaccgcg-tgc 3097
Query: 842 gcagaaacccccgcgc 857
||||||||||||||||
Sbjct: 3096 gcagaaacccccgcgc 3081
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6197
Number of Sequences: 1807
Number of extensions: 6197
Number of successful extensions: 648
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)